8EFX
Structure of OtDUB DUB Domain disulfide crosslinked with Ubiquitin
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 24-ID-C |
| Synchrotron site | APS |
| Beamline | 24-ID-C |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2021-03-11 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.97918 |
| Spacegroup name | P 2 21 21 |
| Unit cell lengths | 42.399, 83.008, 99.354 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 63.700 - 1.850 |
| R-factor | 0.1998 |
| Rwork | 0.198 |
| R-free | 0.22920 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1ubq 6ups |
| RMSD bond length | 0.007 |
| RMSD bond angle | 0.792 |
| Data reduction software | HKL-3000 |
| Data scaling software | HKL-3000 |
| Phasing software | HKL-3000 |
| Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 63.700 | 1.920 |
| High resolution limit [Å] | 1.840 | 1.850 |
| Number of reflections | 30867 | 3002 |
| <I/σ(I)> | 11.57 | |
| Completeness [%] | 99.7 | |
| Redundancy | 6.56 | |
| CC(1/2) | 0.997 | 0.481 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 294 | 0.16M Magnesium chloride, 0.08M Tris at pH 8.5, 24% PEG 8000 and 20% glycerol |






