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8EDK

Structure of C. elegans UNC-6 LamN and EGF domains

This is a non-PDB format compatible entry.
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]120
Detector technologyPIXEL
Collection date2022-07-22
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.97918
Spacegroup nameP 41 21 2
Unit cell lengths70.243, 70.243, 287.353
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution68.230 - 2.500
R-factor0.222
Rwork0.220
R-free0.25880
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)AlphaFold2 model for UNC-6
RMSD bond length0.008
RMSD bond angle0.899
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]200.0002.650
High resolution limit [Å]2.5002.500
Rmerge0.0872.164
Rmeas0.0902.245
Number of reflections258064008
<I/σ(I)>19.431.25
Completeness [%]98.898.3
Redundancy13.113.7
CC(1/2)0.9990.700
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP82950.1 M Tris, pH 8.0, 10% (w/v) Polyethylene glycol 8,000

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