8EBC
Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase from Listeria monocytogenes in the complex with IMP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-06-12 |
Detector | DECTRIS PILATUS3 X 6M |
Wavelength(s) | 0.97915 |
Spacegroup name | P 1 |
Unit cell lengths | 78.977, 95.699, 97.604 |
Unit cell angles | 111.36, 105.17, 107.61 |
Refinement procedure
Resolution | 39.880 - 2.500 |
R-factor | 0.1961 |
Rwork | 0.194 |
R-free | 0.23860 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDBID 1PVN |
RMSD bond length | 0.002 |
RMSD bond angle | 0.427 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | HKL-3000 |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.540 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.056 | 0.426 |
Rpim | 0.051 | |
Number of reflections | 78331 | 3560 |
<I/σ(I)> | 13.11 | 1.71 |
Completeness [%] | 97.7 | 88.6 |
Redundancy | 2.2 | 2 |
CC(1/2) | 0.784 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.6 | 289 | 0.2 M ammonium formate pH 6.6, 20 % (w/v) PEG |