8EBB
Crystal structure of SIX6 from Fusarium oxysporum f. sp. lycopersici
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-08-20 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.95336 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 76.303, 93.544, 60.489 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.770 - 1.880 |
R-factor | 0.1948 |
Rwork | 0.193 |
R-free | 0.22100 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | SIX6 alphafold model |
RMSD bond length | 0.008 |
RMSD bond angle | 0.933 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.400 | 1.920 |
High resolution limit [Å] | 1.880 | 1.880 |
Rmerge | 0.070 | 1.429 |
Rmeas | 0.082 | 1.668 |
Rpim | 0.042 | 0.857 |
Number of reflections | 35252 | 2205 |
<I/σ(I)> | 11.8 | 0.9 |
Completeness [%] | 96.8 | |
Redundancy | 6.9 | |
CC(1/2) | 0.990 | 0.571 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2 M Ammonium tartrate, 20% PEG3350 |