8EA9
NKG2D complexed with inhibitor 4d
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-06-18 |
Detector | DECTRIS EIGER2 X 9M |
Wavelength(s) | 1.0 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 99.719, 43.400, 64.777 |
Unit cell angles | 90.00, 102.83, 90.00 |
Refinement procedure
Resolution | 32.280 - 1.580 |
R-factor | 0.181 |
Rwork | 0.179 |
R-free | 0.21210 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1mpu |
RMSD bond length | 0.005 |
RMSD bond angle | 0.872 |
Data reduction software | DIALS |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.17.1_3660: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 43.470 | 43.490 | 1.610 |
High resolution limit [Å] | 1.580 | 4.290 | 1.580 |
Rmeas | 0.053 | 0.039 | 0.191 |
Rpim | 0.029 | 0.021 | 0.123 |
Total number of observations | 114849 | 6635 | 2805 |
Number of reflections | 36337 | 1943 | 1426 |
<I/σ(I)> | 13.3 | 24.1 | 3.8 |
Completeness [%] | 97.4 | 99.8 | 76 |
Redundancy | 3.2 | 3.4 | 2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.15 - 0.22 M NaNO3 20 - 31 % (w/v) PEG 3350 |