8EA7
NKG2D complexed with inhibitor 3g
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-12-16 |
Detector | DECTRIS EIGER2 X 9M |
Wavelength(s) | 1.0 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 100.582, 43.138, 67.545 |
Unit cell angles | 90.00, 107.42, 90.00 |
Refinement procedure
Resolution | 39.350 - 1.280 |
R-factor | 0.1941 |
Rwork | 0.193 |
R-free | 0.21470 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1mpu |
RMSD bond length | 0.005 |
RMSD bond angle | 0.851 |
Data reduction software | DIALS |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.17.1_3660: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.350 | 1.300 |
High resolution limit [Å] | 1.280 | 1.280 |
Rmerge | 0.043 | 0.664 |
Rmeas | 0.051 | 0.910 |
Rpim | 0.027 | 0.618 |
Total number of observations | 187069 | 1811 |
Number of reflections | 61420 | 1064 |
<I/σ(I)> | 11.5 | 1 |
Completeness [%] | 85.9 | |
Redundancy | 3 | 1.7 |
CC(1/2) | 0.998 | 0.571 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.15 - 0.22 M NaNO3 20 - 31 % (w/v) PEG 3350 |