8E8F
Human DNA polymerase eta-DNA-rU-ended primer ternary mismatch complex:reaction with 10 mM Mn2+ for 120s
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-04-21 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.976180 |
Spacegroup name | P 61 |
Unit cell lengths | 98.236, 98.236, 81.296 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 32.160 - 2.140 |
R-factor | 0.2036 |
Rwork | 0.200 |
R-free | 0.27360 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7m7l |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 32.160 | 32.160 | 2.250 |
High resolution limit [Å] | 2.120 | 6.330 | 2.120 |
Rmerge | 0.048 | 0.033 | 0.460 |
Rmeas | 0.051 | 0.034 | 0.517 |
Total number of observations | 454789 | ||
Number of reflections | 48711 | 1863 | 7232 |
<I/σ(I)> | 22.69 | 65.28 | 2.29 |
Completeness [%] | 98.5 | 99.7 | 90.7 |
Redundancy | 9.336 | 10.275 | 4.719 |
CC(1/2) | 1.000 | 0.999 | 0.893 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 298 | PEG 2000MME, 0.1 M MES |