8E8D
Human DNA polymerase eta-DNA-rU-ended primer ternary mismatch complex:reaction with 10 mM Mn2+ for 60s
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-04-21 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.976180 |
Spacegroup name | P 61 |
Unit cell lengths | 98.480, 98.480, 81.680 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 31.430 - 2.090 |
R-factor | 0.2015 |
Rwork | 0.200 |
R-free | 0.23490 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7m7l |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 31.430 | 31.430 | 2.110 |
High resolution limit [Å] | 2.050 | 9.180 | 2.050 |
Rmerge | 0.750 | 0.484 | 0.498 |
Rmeas | 0.764 | 0.493 | 0.614 |
Total number of observations | 687643 | ||
Number of reflections | 52662 | 616 | 2102 |
<I/σ(I)> | 16.87 | 47.4 | 1.71 |
Completeness [%] | 95.3 | 99.4 | 51.6 |
Redundancy | 13.058 | 22.485 | 2.659 |
CC(1/2) | 0.999 | 0.999 | 0.717 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 298 | PEG 2000MME, 0.1 M MES |