8E89
Human DNA polymerase eta-DNA-rU-ended primer-binary complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-06-12 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 1.127130 |
Spacegroup name | P 61 |
Unit cell lengths | 97.394, 97.394, 80.911 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 37.400 - 2.200 |
R-factor | 0.2038 |
Rwork | 0.201 |
R-free | 0.26170 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7m7l |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 37.400 | 37.400 | 2.330 |
High resolution limit [Å] | 2.200 | 6.530 | 2.200 |
Rmerge | 0.081 | 0.036 | 0.853 |
Rmeas | 0.085 | 0.038 | 0.896 |
Total number of observations | 451872 | ||
Number of reflections | 43810 | 1663 | 7040 |
<I/σ(I)> | 15.8 | 50.99 | 2.01 |
Completeness [%] | 99.8 | 99.8 | 99 |
Redundancy | 10.314 | 11.184 | 10.762 |
CC(1/2) | 0.999 | 0.999 | 0.839 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 298 | PEG 2000MME, 0.1 M MES |