8E88
Human DNA polymerase eta-DNA-rU-ended primer-dGMPNPP ternary mismatch complex with Mg2+
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2022-02-08 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.978720 |
Spacegroup name | P 61 |
Unit cell lengths | 98.347, 98.347, 81.171 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 42.590 - 2.400 |
R-factor | 0.1964 |
Rwork | 0.195 |
R-free | 0.22390 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7m7l |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.590 | 42.590 | 2.540 |
High resolution limit [Å] | 2.400 | 7.100 | 2.400 |
Rmerge | 0.068 | 0.023 | 0.557 |
Rmeas | 0.075 | 0.025 | 0.648 |
Total number of observations | 183984 | ||
Number of reflections | 34084 | 1315 | 5165 |
<I/σ(I)> | 19.67 | 56.67 | 2.21 |
Completeness [%] | 98.9 | 99.7 | 93.2 |
Redundancy | 5.398 | 5.69 | 3.521 |
CC(1/2) | 0.999 | 1.000 | 0.733 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 298 | PEG 2000MME, 0.1 M MES |