8E6A
Crystal structure of SARS-CoV-2 3CL protease in complex with a p-chlorophenylethanol based inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 291 |
Detector technology | PIXEL |
Collection date | 2021-07-25 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 1.0000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.216, 54.330, 114.740 |
Unit cell angles | 90.00, 100.93, 90.00 |
Refinement procedure
Resolution | 44.400 - 2.050 |
R-factor | 0.205 |
Rwork | 0.202 |
R-free | 0.27700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6xmk |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.7) |
Phasing software | PHASER |
Refinement software | PHENIX (DEV_4273) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.940 | 48.940 | 2.110 |
High resolution limit [Å] | 2.050 | 8.940 | 2.050 |
Rmerge | 0.067 | 0.028 | 0.809 |
Total number of observations | 116729 | 1349 | 9367 |
Number of reflections | 34309 | 439 | 2621 |
<I/σ(I)> | 10.3 | 26.1 | 1.6 |
Completeness [%] | 99.4 | 98 | 99.4 |
Redundancy | 3.4 | 3.1 | 3.6 |
CC(1/2) | 0.998 | 0.998 | 0.653 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 291 | 20% (w/v) PEG 6000, 100 mM MES, 200 mM NaCl |