8E5H
Old Yellow Enzyme 5 (PcOYE5) from Pseudomonas chloritidismutans
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-03-15 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9537 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 50.417, 70.090, 97.877 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.940 - 1.270 |
R-factor | 0.1366 |
Rwork | 0.136 |
R-free | 0.15630 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | AlphaFold |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.7) |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.940 | 48.940 | 1.290 |
High resolution limit [Å] | 1.270 | 6.940 | 1.270 |
Rmerge | 0.102 | 0.062 | 1.127 |
Rmeas | 0.106 | 0.066 | 1.176 |
Rpim | 0.029 | 0.020 | 0.329 |
Total number of observations | 1233665 | 7931 | 51859 |
Number of reflections | 92385 | 667 | 4290 |
<I/σ(I)> | 12.7 | 26.4 | 2.4 |
Completeness [%] | 99.7 | 99.9 | 94.8 |
Redundancy | 13.4 | 11.9 | 12.1 |
CC(1/2) | 0.998 | 0.989 | 0.792 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 291 | 25% PEG 3350, 0.1M Bis-Tris pH 5.5 |