8E1B
Crystal Structure of Nanobody VHH108 Specific for PA14 Cif
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | NSLS-II BEAMLINE 17-ID-1 |
| Synchrotron site | NSLS-II |
| Beamline | 17-ID-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2020-01-22 |
| Detector | DECTRIS EIGER X 9M |
| Wavelength(s) | 0.920099 |
| Spacegroup name | P 21 21 2 |
| Unit cell lengths | 30.871, 112.147, 33.198 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 33.200 - 1.650 |
| R-factor | 0.2117 |
| Rwork | 0.211 |
| R-free | 0.21480 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4jvp |
| RMSD bond length | 0.007 |
| RMSD bond angle | 0.836 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 33.200 | 1.709 |
| High resolution limit [Å] | 1.650 | 1.650 |
| Rmerge | 0.054 | 1.192 |
| Rmeas | 0.059 | 1.319 |
| Rpim | 0.024 | 0.561 |
| Number of reflections | 14566 | 1430 |
| <I/σ(I)> | 15.12 | 1.14 |
| Completeness [%] | 99.9 | 99.93 |
| Redundancy | 6.3 | 5.4 |
| CC(1/2) | 0.999 | 0.623 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 292.8 | 200 mM sodium thiocyanate, 20% (w/v) PEG3350 |






