8E08
Crystal structure of HPSE P6 in complex with tetraose pentosan inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-12-01 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9537 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 59.274, 75.627, 125.467 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.280 - 1.930 |
R-factor | 0.1741 |
Rwork | 0.173 |
R-free | 0.20180 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7rg8 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.112 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.280 | 1.980 |
High resolution limit [Å] | 1.930 | 1.930 |
Rmerge | 0.115 | 0.925 |
Rmeas | 0.120 | 0.960 |
Rpim | 0.033 | 0.257 |
Total number of observations | 561577 | 38828 |
Number of reflections | 43216 | 2843 |
<I/σ(I)> | 11.8 | 3 |
Completeness [%] | 100.0 | |
Redundancy | 13 | 13.7 |
CC(1/2) | 0.997 | 0.938 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 291 | 0.2M Ammonium Sulfate, Sodium Acetate pH 5.5, 20% PEG 4000 |