8DZD
Structure of MS3494 from Mycobacterium smegmatis bound to sucrose
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-05-08 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97946 |
Spacegroup name | P 6 |
Unit cell lengths | 98.463, 98.463, 45.581 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 33.469 - 1.901 |
Rwork | 0.140 |
R-free | 0.17500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7ref |
RMSD bond length | 0.008 |
RMSD bond angle | 1.472 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0352) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 33.469 | 1.950 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.090 | 0.746 |
Rmeas | 0.095 | 0.784 |
Number of reflections | 20058 | 1343 |
<I/σ(I)> | 20.4 | 4.6 |
Completeness [%] | 99.9 | |
Redundancy | 10.2 | |
CC(1/2) | 0.999 | 0.950 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | 26 % PEG 4K, 0.2 M Lithium acetate (pH 7.5) Soaked in 20 % Sucrose |