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8DX4

Clostridioides difficile R20291 minor pilin - PilW fused with Maltose Binding Protein

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-D
Synchrotron siteAPS
Beamline23-ID-D
Temperature [K]80
Detector technologyPIXEL
Collection date2021-10-30
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.0
Spacegroup nameP 1
Unit cell lengths65.326, 81.796, 102.964
Unit cell angles92.44, 90.95, 113.37
Refinement procedure
Resolution39.735 - 2.487
R-factor0.1879
Rwork0.186
R-free0.21820
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4tsm
RMSD bond length0.004
RMSD bond angle0.775
Data reduction softwareautoXDS
Data scaling softwareAimless (0.7.4)
Phasing softwarePHENIX
Refinement softwarePHENIX (1.12_2829)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]102.800102.8002.540
High resolution limit [Å]2.48011.3702.480
Rmerge0.0800.0380.272
Rmeas0.1010.0490.343
Rpim0.0600.0290.207
Total number of observations150043170410852
Number of reflections644706764447
<I/σ(I)>6.814.12.5
Completeness [%]93.394.291.4
Redundancy2.32.52.4
CC(1/2)0.9930.9970.901
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5278Hepes, Cesium Chloride, PEG 3350, n-Octyl-beta-D-glucoside, Sodium Chloride, ethanol

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PDB entries from 2024-09-04

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