Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8DWM

Host-guest complex of bleomycin A2 fully bound to CTTAGTTATAACTAAG

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyCCD
Collection date2009-10-01
DetectorADSC QUANTUM 315r
Wavelength(s)0.97948
Spacegroup nameP 21 21 2
Unit cell lengths52.808, 144.292, 49.885
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.880 - 2.990
R-factor0.2282
Rwork0.225
R-free0.29670
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1ztw
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0003.110
High resolution limit [Å]2.9906.4603.000
Rmerge0.0860.0420.287
Number of reflections7774901542
<I/σ(I)>12.5
Completeness [%]94.798.467.7
Redundancy3.843.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP293Crystals of the host-guest complex were grown in 5 mM magnesium acetate, 0.05 M ADA pH 6.5, 9% PEG4000. To obtain complexes with BLM, crystals were soaked in well solutions containing 0.1 mM BLM followed by stabilization in 9% PEG4000, 5 mM magnesium acetate, 100 mM HEPES, pH 8.0, 20% ethylene glycol, 0.25 mM BLM until unit cell changes correlating with binding of BLM were detected.

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon