8DTS
X-ray crystal structure of AFSSFN from chaperone DNAJB8.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-07-18 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.979 |
Spacegroup name | P 1 |
Unit cell lengths | 38.380, 9.480, 30.400 |
Unit cell angles | 90.00, 90.00, 90.01 |
Refinement procedure
Resolution | 19.190 - 0.750 |
R-factor | 0.2053 |
Rwork | 0.203 |
R-free | 0.22550 |
Structure solution method | AB INITIO PHASING |
RMSD bond length | 0.007 |
RMSD bond angle | 1.114 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SHELXD |
Refinement software | PHENIX (1.20_4459) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 38.380 | 0.770 |
High resolution limit [Å] | 0.750 | 0.750 |
Rmerge | 0.113 | 0.582 |
Rmeas | 0.128 | 0.748 |
Number of reflections | 48640 | 2698 |
<I/σ(I)> | 5.72 | 1.31 |
Completeness [%] | 88.5 | 66.7 |
Redundancy | 3.7 | 2.3 |
CC(1/2) | 0.991 | 0.726 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 291.15 | AFSSFN synthetic peptide (Genscript) was dissolved to 30 mg/mL in water and crystallized by hanging drop at a 1:2 ratio with 20% PEG 8000, 100 mM HEPES pH 7.5. |