8DQ5
X-ray crystal structure of Flavobacterium johnsoniae dimanganese(II) class Id ribonucleotide reductase T191I variant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-06-17 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.97872 |
Spacegroup name | P 31 |
Unit cell lengths | 53.771, 53.771, 221.288 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 46.570 - 2.100 |
R-factor | 0.2483 |
Rwork | 0.246 |
R-free | 0.28200 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6cwp |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.140 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmeas | 0.853 | |
Rpim | 0.042 | 0.387 |
Number of reflections | 36014 | 1964 |
<I/σ(I)> | 18.76 | 1.6 |
Completeness [%] | 98.5 | 92.9 |
Redundancy | 5.5 | 4.1 |
CC(1/2) | 0.899 | 0.678 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.6 | 294 | 0.2 M Mg-acetate, 20% (v/v) PEG3350 |