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8DKO

Minimal PutA proline dehydrogenase domain (design #1) complexed with S-(-)-tetrahydro-2-furoic acid

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyPIXEL
Collection date2022-02-25
DetectorDECTRIS EIGER2 X 16M
Wavelength(s)0.97918
Spacegroup nameP 1
Unit cell lengths48.980, 54.232, 76.191
Unit cell angles104.02, 100.50, 108.86
Refinement procedure
Resolution47.940 - 1.800
R-factor0.1826
Rwork0.182
R-free0.22300
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6x9a
Data reduction softwareXDS
Data scaling softwareAimless (0.5.32)
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.2)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]47.94047.9401.840
High resolution limit [Å]1.8009.0001.800
Rmerge0.1010.0610.666
Rmeas0.1190.0710.773
Rpim0.0620.0360.392
Total number of observations216976177113292
Number of reflections590094663503
<I/σ(I)>7.317.61.7
Completeness [%]92.290.593.1
Redundancy3.73.83.8
CC(1/2)0.9930.9920.802
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2930.1 M potassium thiocyanate and 25% (w/v) PEG MME 2000

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PDB entries from 2024-07-17

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