8DHV
Treponema lecithinolyticum beta-glucuronidase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-06-18 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.03318 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 94.302, 94.302, 287.954 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.150 - 1.600 |
R-factor | 0.1669 |
Rwork | 0.167 |
R-free | 0.19600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6bjq |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.7) |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 89.620 | 89.620 | 1.630 |
High resolution limit [Å] | 1.600 | 8.760 | 1.600 |
Rmerge | 0.092 | 0.048 | 1.817 |
Rmeas | 0.097 | 0.050 | 2.011 |
Rpim | 0.028 | 0.015 | 0.848 |
Total number of observations | 1896978 | 12748 | 45191 |
Number of reflections | 170930 | 1263 | 8355 |
<I/σ(I)> | 13.1 | 44.8 | 0.9 |
Completeness [%] | 99.7 | 100 | 99.8 |
Redundancy | 11.1 | 10.1 | 5.4 |
CC(1/2) | 0.999 | 0.998 | 0.524 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293.15 | 2 M ammonium sulfate, 0.1 M MOPS, 4% (v/v) MPD |