8DG2
Crystal Structure of EcDsbA in a complex with DMSO
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-08-11 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.95372 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 117.246, 63.095, 74.547 |
Unit cell angles | 90.00, 125.25, 90.00 |
Refinement procedure
Resolution | 47.870 - 1.950 |
R-factor | 0.1904 |
Rwork | 0.189 |
R-free | 0.22160 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1fvk |
RMSD bond length | 0.008 |
RMSD bond angle | 0.908 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.19_4092) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.110 | 2.000 |
High resolution limit [Å] | 1.950 | 1.950 |
Rmerge | 0.096 | 1.155 |
Rmeas | 0.107 | |
Rpim | 0.056 | 0.727 |
Number of reflections | 32516 | 2243 |
<I/σ(I)> | 9.4 | 1.5 |
Completeness [%] | 100.0 | 100 |
Redundancy | 6.9 | 6.7 |
CC(1/2) | 0.998 | 0.763 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.1 | 293.15 | 11-13 % PEG 8000, 5-7.5% GLYCEROL, 100MM NA CACODYLATE PH6.1, 1MM CuCl2 |