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8DE5

Structure of glyceraldehyde-3-phosphate dehydrogenase from Paracoccidioides lutzii

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsLNLS SIRUS BEAMLINE MANACA
Synchrotron siteLNLS SIRUS
BeamlineMANACA
Temperature [K]100
Detector technologyPIXEL
Collection date2021-11-02
DetectorDECTRIS PILATUS 2M
Wavelength(s)0.97718
Spacegroup nameI 41 2 2
Unit cell lengths118.713, 118.713, 158.295
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution83.940 - 2.020
R-factor0.1665
Rwork0.165
R-free0.19640
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7u4s
RMSD bond length0.003
RMSD bond angle0.567
Data reduction softwareDIALS (2.2.11-gad03a188b-release)
Data scaling softwareAimless (0.7.7)
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]83.9402.050
High resolution limit [Å]2.0202.020
Rmerge0.6063.767
Rmeas0.6113.840
Rpim0.0740.742
Number of reflections373291814
<I/σ(I)>10.41.1
Completeness [%]100.0100
Redundancy56.626.6
CC(1/2)0.9980.372
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP9.3291.150.2 M ammonium sulfate, 25.5% w/v PEG4000

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