8DCT
Lysozyme cluster 3 dual apo structure
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-1 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-12-14 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.92 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 79.230, 79.230, 37.520 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.650 - 2.000 |
R-factor | 0.20917 |
Rwork | 0.206 |
R-free | 0.26479 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4n8z |
RMSD bond length | 0.005 |
RMSD bond angle | 1.420 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.120 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.360 | 1.900 |
Number of reflections | 14274 | 2226 |
<I/σ(I)> | 2.34 | |
Completeness [%] | 92.4 | |
Redundancy | 2.99 | |
CC(1/2) | 0.869 | 0.145 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 290 | 4% SODIUM CHLORIDE, 100MM SODIUM ACETATE PH 4.6, 120MG/ML |