8DAX
New insights into the P186 flip and oligomeric state of Staphylococcus aureus exfoliative toxin E: implications for the exfoliative mechanism
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | LNLS BEAMLINE W01B-MX2 |
Synchrotron site | LNLS |
Beamline | W01B-MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-04-23 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1.45870 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 97.744, 97.744, 116.657 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.920 - 1.610 |
R-factor | 0.2158 |
Rwork | 0.214 |
R-free | 0.24790 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5c2z |
RMSD bond length | 0.011 |
RMSD bond angle | 1.776 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0257) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.920 | 48.920 | 1.710 |
High resolution limit [Å] | 1.610 | 4.820 | 1.610 |
Rmerge | 0.075 | 0.039 | 2.322 |
Rmeas | 0.078 | 0.041 | 2.419 |
Total number of observations | 1847423 | ||
Number of reflections | 138763 | 5216 | 22454 |
<I/σ(I)> | 17.85 | 69.15 | 0.95 |
Completeness [%] | 100.0 | 99.8 | 99.9 |
Redundancy | 13.314 | 14.943 | 12.74 |
CC(1/2) | 1.000 | 0.999 | 0.455 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 291 | 4 M Sodium Formate |