8D53
Crystal Structure of Mosaic HIV-1 Envelope (MosM3.3) in Complex with antibodies PGT124 and 35O22 at 3.25 Angstrom
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-07-10 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.03316 |
Spacegroup name | P 3 1 2 |
Unit cell lengths | 139.266, 139.266, 320.332 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 42.790 - 3.240 |
R-factor | 0.3176 |
Rwork | 0.317 |
R-free | 0.33080 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5cez |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.1_4122) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.310 |
High resolution limit [Å] | 3.240 | 8.810 | 3.250 |
Rmerge | 0.157 | 0.058 | 1.285 |
Rmeas | 0.173 | 0.065 | 1.386 |
Rpim | 0.070 | 0.028 | 0.505 |
Number of reflections | 47686 | 2947 | 1118 |
<I/σ(I)> | 5.3 | ||
Completeness [%] | 83.6 | 98.2 | 39.8 |
Redundancy | 5 | 4.8 | 5.9 |
CC(1/2) | 0.995 | 0.621 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 1.825M ammonium sulfate, 2% PGE 400, 0.1M HEPES, pH 7.1 |