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8D3B

Hexameric HIV-1 (M-group) Q50Y/R120 mutant

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU FR-E SUPERBRIGHT
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2015-04-14
DetectorMAR scanner 345 mm plate
Wavelength(s)1.5418
Spacegroup nameC 1 2 1
Unit cell lengths90.920, 157.310, 120.400
Unit cell angles90.00, 107.28, 90.00
Refinement procedure
Resolution64.920 - 3.300
R-factor0.2408
Rwork0.239
R-free0.27480
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7t13
RMSD bond length0.002
RMSD bond angle0.395
Data reduction softwareiMOSFLM
Data scaling softwareAimless (0.5.7)
Phasing softwarePHASER (2.5.7)
Refinement softwarePHENIX (1.14)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]76.01076.0103.520
High resolution limit [Å]3.2909.3203.290
Rmerge0.1920.0600.595
Rmeas0.2290.0730.710
Rpim0.1230.0410.382
Total number of observations80466361813931
Number of reflections2439211044366
<I/σ(I)>512.42
Completeness [%]99.799.699
Redundancy3.33.33.2
CC(1/2)0.9760.9780.813
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP829020% PEG550MME, 0.1M TRIS (pH 8.0), 0.15M KSCN, 10mM ATP, 3% EtOH

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PDB entries from 2025-06-18

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