8D3B
Hexameric HIV-1 (M-group) Q50Y/R120 mutant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2015-04-14 |
Detector | MAR scanner 345 mm plate |
Wavelength(s) | 1.5418 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 90.920, 157.310, 120.400 |
Unit cell angles | 90.00, 107.28, 90.00 |
Refinement procedure
Resolution | 64.920 - 3.300 |
R-factor | 0.2408 |
Rwork | 0.239 |
R-free | 0.27480 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7t13 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.395 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless (0.5.7) |
Phasing software | PHASER (2.5.7) |
Refinement software | PHENIX (1.14) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 76.010 | 76.010 | 3.520 |
High resolution limit [Å] | 3.290 | 9.320 | 3.290 |
Rmerge | 0.192 | 0.060 | 0.595 |
Rmeas | 0.229 | 0.073 | 0.710 |
Rpim | 0.123 | 0.041 | 0.382 |
Total number of observations | 80466 | 3618 | 13931 |
Number of reflections | 24392 | 1104 | 4366 |
<I/σ(I)> | 5 | 12.4 | 2 |
Completeness [%] | 99.7 | 99.6 | 99 |
Redundancy | 3.3 | 3.3 | 3.2 |
CC(1/2) | 0.976 | 0.978 | 0.813 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 290 | 20% PEG550MME, 0.1M TRIS (pH 8.0), 0.15M KSCN, 10mM ATP, 3% EtOH |