8D2Y
Y430F mutant of D-ornithine/D-lysine decarboxylase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-02-27 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0000 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 139.740, 50.740, 73.320 |
Unit cell angles | 90.00, 120.80, 90.00 |
Refinement procedure
Resolution | 36.660 - 1.220 |
R-factor | 0.1344 |
Rwork | 0.134 |
R-free | 0.15180 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6n2h |
RMSD bond length | 0.008 |
RMSD bond angle | 1.145 |
Data reduction software | autoPROC |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 36.660 | 1.265 |
High resolution limit [Å] | 1.220 | 1.220 |
Number of reflections | 101867 | 628 |
<I/σ(I)> | 17.78 | |
Completeness [%] | 77.9 | |
Redundancy | 13.8 | |
CC(1/2) | 0.999 | 0.580 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 0.1 M HEPES, pH 7.5, 0.2-0.4 M NaOAc, 20% PEG 4000 |