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8CNN

BeF3 Phospho-HRas GSA complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2023-02-18
DetectorDECTRIS EIGER2 S 16M
Wavelength(s)0.9763
Spacegroup nameH 3 2
Unit cell lengths87.770, 87.770, 132.381
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution44.170 - 1.480
R-factor0.16509
Rwork0.164
R-free0.18838
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.015
RMSD bond angle1.816
Data reduction softwareDIALS
Data scaling softwareAimless
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0405)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.9201.510
High resolution limit [Å]1.4801.480
Number of reflections329361622
<I/σ(I)>15.81.2
Completeness [%]100.0100
Redundancy20.320.4
CC(1/2)1.0000.559
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP277Protein buffer (phospho-HRas pY64 0.4 mM, RasGAP 0.4 mM, Na-HEPES 20 mM pH = 8.0, MgCl2 5 mM, NaF 20 mM) was mixed with precipitant in a 1:1 ratio with a total drop size of 600 nL. The precipitant solution consits of: 100 mM NaOAc, pH = 4.5, 200 mM Li2SO4, 50% PEG400 (v/v). Protein crystals were soaked in precipitant solutions containing 50-100 mM BeCl2 and subsequently flash-frozen using 20% glycerol as cryoprotectant.

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PDB entries from 2025-06-11

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