8CNN
BeF3 Phospho-HRas GSA complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-02-18 |
Detector | DECTRIS EIGER2 S 16M |
Wavelength(s) | 0.9763 |
Spacegroup name | H 3 2 |
Unit cell lengths | 87.770, 87.770, 132.381 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 44.170 - 1.480 |
R-factor | 0.16509 |
Rwork | 0.164 |
R-free | 0.18838 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.015 |
RMSD bond angle | 1.816 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0405) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.920 | 1.510 |
High resolution limit [Å] | 1.480 | 1.480 |
Number of reflections | 32936 | 1622 |
<I/σ(I)> | 15.8 | 1.2 |
Completeness [%] | 100.0 | 100 |
Redundancy | 20.3 | 20.4 |
CC(1/2) | 1.000 | 0.559 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | Protein buffer (phospho-HRas pY64 0.4 mM, RasGAP 0.4 mM, Na-HEPES 20 mM pH = 8.0, MgCl2 5 mM, NaF 20 mM) was mixed with precipitant in a 1:1 ratio with a total drop size of 600 nL. The precipitant solution consits of: 100 mM NaOAc, pH = 4.5, 200 mM Li2SO4, 50% PEG400 (v/v). Protein crystals were soaked in precipitant solutions containing 50-100 mM BeCl2 and subsequently flash-frozen using 20% glycerol as cryoprotectant. |