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8CNJ

HRas(1-166) in complex with GDP and BeF3-

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2023-02-18
DetectorDECTRIS EIGER2 X 16M
Wavelength(s)0.9763
Spacegroup nameP 21 21 21
Unit cell lengths45.433, 51.957, 136.149
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.589 - 1.350
Rwork0.143
R-free0.17910
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.011
RMSD bond angle1.412
Data reduction softwareDIALS
Data scaling softwareAimless
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0405)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]51.96051.9601.370
High resolution limit [Å]1.3507.3901.350
Rmerge0.0930.0351.532
Rmeas0.1000.0371.712
Rpim0.0380.0140.743
Number of reflections690775332387
<I/σ(I)>13.7
Completeness [%]96.2
Redundancy12.611.88.6
CC(1/2)0.9990.9990.598
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP277BeF3- GSA complexes were obtained under vapour diffusion sitting drop conditions. Protein buffer (HRas pY64 or HRas 0.4 mM, Na-HEPES 20 mM pH = 8.0, MgCl2 5 mM, NaF 20 mM) were mixed with precipitant in a 1:1 ratio with a total drop size of 600 nL. The precipitant solution consited of: (30 % (v/v) MPD, 100 mM imidazole, pH = 7.0). Protein crystals were soaked in their respective precipitant solutions containing 50 mM BeCl2 and subsequently flash-frozen using 20% glycerol as cryoprotectant.

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