8CH4
Crystal structure of the ring cleaving dioxygenase 5-nitrosalicylate 1,2-dioxygenase from Bradyrhizobium sp.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ELETTRA BEAMLINE 11.2C |
| Synchrotron site | ELETTRA |
| Beamline | 11.2C |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-03-08 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 1.0000 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 50.427, 143.173, 60.076 |
| Unit cell angles | 90.00, 107.33, 90.00 |
Refinement procedure
| Resolution | 40.000 - 2.100 |
| R-factor | 0.21899 |
| Rwork | 0.216 |
| R-free | 0.27642 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.006 |
| RMSD bond angle | 1.364 |
| Data reduction software | XDS |
| Data scaling software | XDS |
| Phasing software | MOLREP |
| Refinement software | REFMAC (5.8) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 48.140 | 48.140 | 2.230 |
| High resolution limit [Å] | 2.100 | 6.260 | 2.100 |
| Rmerge | 0.166 | 0.039 | 1.587 |
| Rmeas | 0.180 | 0.043 | 1.722 |
| Number of reflections | 46889 | 1809 | 7465 |
| <I/σ(I)> | 9.09 | ||
| Completeness [%] | 99.2 | ||
| Redundancy | 6.8 | ||
| CC(1/2) | 0.997 | 0.999 | 0.682 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 296 | 30% MPD, 5% PEG 400, 100 mM TRIS-HCl pH 8.5 |






