8CE2
X-ray structure of the adduct formed upon reaction of a B-DNA double helical dodecamer with dirhodium tetraacetate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ELETTRA BEAMLINE 11.2C |
Synchrotron site | ELETTRA |
Beamline | 11.2C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-12-05 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.00 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 25.530, 40.310, 65.710 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.360 - 1.240 |
Rwork | 0.197 |
R-free | 0.22270 |
Structure solution method | SAD |
RMSD bond length | 0.012 |
RMSD bond angle | 3.073 |
Data reduction software | autoPROC |
Data scaling software | autoPROC |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0352) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 34.360 | 1.260 |
High resolution limit [Å] | 1.240 | 1.240 |
Number of reflections | 19898 | 996 |
<I/σ(I)> | 23.2 | |
Completeness [%] | 99.9 | 100 |
Redundancy | 10.8 | 8.4 |
CC(1/2) | 0.999 | 0.785 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 298 | 7% (v/v) 2-methyl-2,4-pentanediol, 20 mM MgCl2, 80 mM spermine tetrahydrochloride, and 60 mM sodium cacodylate at pH 6.5 |