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8CB8

The Transcriptional Regulator PrfA from Listeria Monocytogenes in complex with tetrapeptide Ser-Thr-Leu-Leu

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsMAX IV BEAMLINE BioMAX
Synchrotron siteMAX IV
BeamlineBioMAX
Temperature [K]100
Detector technologyPIXEL
Collection date2019-02-28
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.9184
Spacegroup nameP 21 21 21
Unit cell lengths47.952, 86.133, 115.217
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.890 - 2.250
R-factor0.2269
Rwork0.224
R-free0.28720
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6hck
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.0002.330
High resolution limit [Å]2.2502.250
Rpim0.1061.797
Number of reflections233712282
<I/σ(I)>9.21.6
Completeness [%]100.0100
Redundancy13.43.5
CC(1/2)0.9960.671
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.5291Protein: 3.1-6.6 mg mL-1, 20 mM NaP pH 6.5, 200 mM NaCl was mixed with peptides (0.5-2.5% DMSO, 1-4 mM DTT) in ratio 1:10. Well solution: 100 mM Nacitrate pH 5.1-5.7, 16-26% PEG4000. Dropsize 1:1 microL Cryoprotection: 35% PEG4000

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PDB entries from 2024-08-14

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