Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8CB4

The Transcriptional Regulator PrfA from Listeria Monocytogenes in complex with tripeptide Leu-Leu-Leu

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-2
Synchrotron siteESRF
BeamlineID23-2
Temperature [K]100
Detector technologyPIXEL
Collection date2018-11-12
DetectorDECTRIS PILATUS 2M
Wavelength(s)0.8731
Spacegroup nameP 21 21 21
Unit cell lengths48.099, 86.785, 115.864
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution44.420 - 2.570
R-factor0.2113
Rwork0.208
R-free0.27650
Structure solution methodMOLECULAR REPLACEMENT
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.1002.660
High resolution limit [Å]2.5702.570
Rpim0.0990.927
Number of reflections159321521
<I/σ(I)>81
Completeness [%]99.4
Redundancy4.6
CC(1/2)0.9900.300
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.5291Protein: 3.1-6.6 mg mL-1, 20 mM NaP pH 6.5, 200 mM NaCl was mixed with peptides (0.5-2.5% DMSO, 1-4 mM DTT) in ratio 1:10. Well solution: 100 mM Nacitrate pH 5.1-5.7, 16-26% PEG4000. Dropsize 1:1 microL Cryoprotection: 35% PEG4000

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon