8C9W
Crystal structure of the adenosine A2A receptor (construct A2A-PSB2-bRIL) complexed with Etrumadenant at the orthosteric pocket
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P14 (MX2) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-03-04 |
Detector | DECTRIS EIGER2 S 16M |
Wavelength(s) | 0.97625 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 39.155, 178.226, 139.595 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.240 - 2.114 |
R-factor | 0.1997 |
Rwork | 0.197 |
R-free | 0.26650 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.012 |
RMSD bond angle | 1.305 |
Data reduction software | XDS (Feb 5, 2021 (BUILT 20210323)) |
Data scaling software | STARANISO (2.3.74) |
Phasing software | PHENIX (1.20_4459) |
Refinement software | PHENIX (1.20_4459) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 38.243 | 2.316 |
High resolution limit [Å] | 2.114 | 2.114 |
Rmerge | 0.130 | 1.697 |
Rmeas | 0.136 | 1.780 |
Rpim | 0.037 | 0.521 |
Number of reflections | 21413 | 1072 |
<I/σ(I)> | 13.1 | 1.3 |
Completeness [%] | 74.8 | |
Redundancy | 13.3 | |
CC(1/2) | 0.999 | 0.529 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 7.4 | 293 | 30 % (w/v) PEG400, 7 % (w/v) Tacsimate pH 7.0,100 mM HEPES-Na pH 7.4, 1.8 % (w/v) 2,5-hexandiol, 25 microM Etrumadenant |