Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8C85

Crystal structure of human transthyretin in complex with 3-O-methyltolcapone analogue 1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P13 (MX1)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP13 (MX1)
Temperature [K]100
Detector technologyPIXEL
Collection date2021-12-03
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.885
Spacegroup nameP 21 21 2
Unit cell lengths42.059, 84.862, 64.275
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution37.680 - 1.190
R-factor0.1434
Rwork0.142
R-free0.16790
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.020
RMSD bond angle1.669
Data reduction softwareXDS
Data scaling softwareAimless
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]42.0601.210
High resolution limit [Å]1.1901.190
Rmerge0.0671.205
Rpim0.0280.533
Number of reflections744283634
<I/σ(I)>11.51.5
Completeness [%]99.9100
Redundancy7.16.8
CC(1/2)0.9990.520
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52980.2 M calcium acetate hydrate, 0.1 M Tris 7.5, and 25% w/v PEG 2000 MME

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon