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8C6R

PBP AccA from A. tumefaciens Bo542 in apoform 4

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSOLEIL BEAMLINE PROXIMA 2
Synchrotron siteSOLEIL
BeamlinePROXIMA 2
Temperature [K]100
Detector technologyPIXEL
Collection date2021-03-26
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.97856
Spacegroup nameP 21 21 21
Unit cell lengths53.339, 59.341, 181.378
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution26.940 - 1.884
R-factor0.21
Rwork0.208
R-free0.25070
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4zeb
RMSD bond length0.009
RMSD bond angle1.050
Data reduction softwareautoPROC
Data scaling softwareAimless (0.7.4)
Phasing softwarePHASER
Refinement softwareBUSTER (2.10.4)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]90.68990.6892.145
High resolution limit [Å]1.8846.9051.884
Rmerge0.1400.0451.532
Rmeas0.1460.0471.614
Rpim0.0410.0130.495
Total number of observations2824911345511289
Number of reflections2193210971098
<I/σ(I)>12.538.371.68
Completeness [%]91.599.664.9
Completeness (spherical) [%]46.299.67.3
Completeness (ellipsoidal) [%]91.599.664.9
Redundancy12.8812.2710.28
CC(1/2)0.9980.9990.587
Anomalous completeness (spherical)43.8100.06.1
Anomalous completeness90.9100.062.1
Anomalous redundancy7.07.55.8
CC(ano)-0.149-0.395-0.035
|DANO|/σ(DANO)0.80.60.7
Diffraction limitsPrincipal axes of ellipsoid fitted to diffraction cut-off surface
3.219 Å1.000, 1.000, 1.000
2.323 Å0.000, 0.000, 0.000
1.811 Å0.000, 0.000, 0.000
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.6292PEG 4000, Na citrate and AcNH4

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PDB entries from 2024-07-31

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