8C25
purine nucleoside phosphorylase in complex with JS-375
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-08-10 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.918 |
Spacegroup name | P 21 3 |
Unit cell lengths | 125.120, 125.120, 125.120 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.280 - 1.560 |
R-factor | 0.15348 |
Rwork | 0.153 |
R-free | 0.18450 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.011 |
RMSD bond angle | 1.674 |
Data reduction software | XDS |
Data scaling software | XDS |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 4.673 | 1.650 |
High resolution limit [Å] | 1.560 | 4.650 | 1.560 |
Rmerge | 0.264 | 0.054 | 2.729 |
Rmeas | 0.271 | 0.056 | 2.842 |
Number of reflections | 180675 | 6796 | 29016 |
<I/σ(I)> | 12.83 | ||
Completeness [%] | 99.8 | ||
Redundancy | 19.2 | ||
CC(1/2) | 0.998 | 1.000 | 0.397 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291.15 | 2M Sodium chloride, 100 mM Sodium acetate, pH 4.6 |