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8BWA

Crystal structure of human Twisted gastrulation protein homolog 1 (TWSG1) in complex with platinum

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2020-01-31
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.03003
Spacegroup nameP 65 2 2
Unit cell lengths98.430, 98.430, 188.160
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution49.220 - 3.610
R-factor0.3415
Rwork0.339
R-free0.39020
Structure solution methodSAD
RMSD bond length0.002
RMSD bond angle0.596
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwareautoSHARP
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]62.7203.670
High resolution limit [Å]3.6103.610
Rmerge0.1437.612
Rmeas0.1467.767
Rpim0.0291.524
Number of reflections6653319
<I/σ(I)>13.60.6
Completeness [%]99.599.7
Redundancy25.825.4
CC(1/2)0.9990.247
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2940.77 M LiCl, 15.5% w/v PEG 6000, 77 mM HEPES pH 7.0, 5.2% 2,2,2-trifluoroethanol. The crystal was soaked in saturated solution of di-mu-iodobis(ethylenediamine)diplatinum(2) nitrate (PIP) solution before data collection.

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