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8BOM

Crystal Structure of Ephrin A2 (EphA2) Receptor Protein Kinase with Compound 14

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsBESSY BEAMLINE 14.1
Synchrotron siteBESSY
Beamline14.1
Temperature [K]100
Detector technologyPIXEL
Collection date2020-10-23
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.9184
Spacegroup nameP 1 21 1
Unit cell lengths32.560, 107.000, 40.360
Unit cell angles90.00, 108.56, 90.00
Refinement procedure
Resolution31.120 - 1.120
R-factor0.1641
Rwork0.164
R-free0.17680
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6q7d
RMSD bond length0.009
RMSD bond angle1.124
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]38.2601.190
High resolution limit [Å]1.1201.120
Rmeas0.0930.184
Number of reflections9490714488
<I/σ(I)>11.50.95
Completeness [%]94.489.5
Redundancy6.976.8
CC(1/2)1.0000.430
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.629137,5 % Precipitant Mix 4 (25% (v/v) Hexylene glycol, 25% (w/v) Poly(ethylene glycol) 1000, 25% (w/v) Poly(ethylene glycol) 3350), 0.1M Bicin pH 7.6, 0.1 M Amino acids mix (0.2 M DL-Alanine, 0.2M DL-Glutamic acid monohydrate, 0.2M DL-Lysine monohydrochloride, 0.2M DL-Serine, 0.2M Glycine)

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