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8BOF

Crystal Structure of Ephrin A2 (EphA2) Receptor Protein Kinase with Compound 12

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsBESSY BEAMLINE 14.1
Synchrotron siteBESSY
Beamline14.1
Temperature [K]100
Detector technologyPIXEL
Collection date2020-10-23
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.9184
Spacegroup nameP 1 21 1
Unit cell lengths32.580, 106.430, 40.300
Unit cell angles90.00, 108.61, 90.00
Refinement procedure
Resolution31.030 - 1.820
R-factor0.1873
Rwork0.186
R-free0.21630
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6q7d
RMSD bond length0.018
RMSD bond angle1.268
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]38.2001.930
High resolution limit [Å]1.8201.820
Rmeas0.0230.217
Number of reflections232123669
<I/σ(I)>8.351.03
Completeness [%]98.796.8
Redundancy6.786.77
CC(1/2)0.9900.480
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.529137,5 % Precipitant Mix 4 (25% (v/v) Hexylene glycol, 25% (w/v) Poly(ethylene glycol) 1000, 25% (w/v) Poly(ethylene glycol) 3350), 0.1M Buffer system 3 pH 8.5 (1M BICINE, 1M Trizma base), 0.275 M Amino acids Mix (0.2 M DL-Alanine,0.2M DL-Glutamic acid monohydrate, 0.2M DL-Lysine monohydrochloride, 0.2M DL-Serine, 0.2M Glycine)

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