8BNB
Crystal structure of Trichoplax Scribble PDZ2 domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-09-28 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.95372 |
Spacegroup name | P 1 |
Unit cell lengths | 32.781, 32.946, 42.710 |
Unit cell angles | 93.63, 95.65, 113.74 |
Refinement procedure
Resolution | 29.970 - 2.110 |
R-factor | 0.2309 |
Rwork | 0.230 |
R-free | 0.25420 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7jo7 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.404 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.970 | 2.190 |
High resolution limit [Å] | 2.110 | 2.110 |
Number of reflections | 8998 | 874 |
<I/σ(I)> | 5.54 | |
Completeness [%] | 97.2 | |
Redundancy | 3.3 | |
CC(1/2) | 0.992 | 0.622 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 1.6 M sodium citrate, pH 5.5. |