8BMZ
Bacteroides thetaiotaomicron surface lipoprotein BT1954 bound to adenosylcobalamin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-09-17 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.89843 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 80.723, 58.709, 101.894 |
Unit cell angles | 90.00, 104.13, 90.00 |
Refinement procedure
Resolution | 70.276 - 2.300 |
Rwork | 0.223 |
R-free | 0.26800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3dsm |
RMSD bond length | 0.012 |
RMSD bond angle | 1.790 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0352) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 70.280 | 70.280 | 2.380 |
High resolution limit [Å] | 2.300 | 8.910 | 2.300 |
Rmerge | 0.231 | 0.082 | 0.957 |
Rmeas | 0.273 | 0.096 | 1.142 |
Rpim | 0.144 | 0.049 | 0.617 |
Number of reflections | 41492 | 41473 | 4043 |
<I/σ(I)> | 5.1 | ||
Completeness [%] | 100.0 | ||
Redundancy | 6.8 | 6.8 | 6.5 |
CC(1/2) | 0.984 | 0.994 | 0.696 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2M Lithium sulphate, 0.1M Tris pH 8.5, 1.26 M ammonium sulphate |