8BJV
Crystal structure of YopR
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALBA BEAMLINE XALOC |
| Synchrotron site | ALBA |
| Beamline | XALOC |
| Temperature [K] | 80 |
| Detector technology | PIXEL |
| Collection date | 2022-05-05 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.97926 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 185.912, 107.750, 52.870 |
| Unit cell angles | 90.00, 90.80, 90.00 |
Refinement procedure
| Resolution | 93.220 - 2.200 |
| R-factor | 0.21899 |
| Rwork | 0.216 |
| R-free | 0.25437 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 8b6j |
| RMSD bond length | 0.011 |
| RMSD bond angle | 1.472 |
| Data reduction software | XDS |
| Data scaling software | SCALA |
| Phasing software | MOLREP |
| Refinement software | REFMAC (7.0.028) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 93.220 | 2.320 |
| High resolution limit [Å] | 2.200 | 2.200 |
| Rmeas | 0.077 | 0.648 |
| Rpim | 0.030 | 0.323 |
| Total number of observations | 306236 | 21760 |
| Number of reflections | 50520 | 5767 |
| <I/σ(I)> | 13.8 | 1.9 |
| Completeness [%] | 95.6 | |
| Redundancy | 6.1 | 3.8 |
| CC(1/2) | 0.999 | 0.816 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 294 | 20 % w/v Polyethylene glycol 6,000 100 mM tri-Sodium citrate; pH 5.0 |
