8BJR
Crystal structure of Paradendryphiella salina PL7C alginate lyase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P14 (MX2) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-09-01 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 0.6888 |
Spacegroup name | P 1 |
Unit cell lengths | 33.791, 39.804, 42.527 |
Unit cell angles | 73.63, 76.35, 70.07 |
Refinement procedure
Resolution | 27.500 - 1.100 |
R-factor | 0.1277 |
Rwork | 0.127 |
R-free | 0.14990 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6ywf |
RMSD bond length | 0.006 |
RMSD bond angle | 0.922 |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 27.500 | 1.140 |
High resolution limit [Å] | 1.100 | 1.100 |
Number of reflections | 72994 | 7116 |
<I/σ(I)> | 7.41 | |
Completeness [%] | 90.1 | |
Redundancy | 3.8 | |
CC(1/2) | 1.000 | 0.830 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2M (NH4)2SO4; 25% PEG4000 |