8BJ4
Crystal structure of Medicago truncatula histidinol-phosphate aminotransferase (HISN6) in apo form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-10-20 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 74.039, 93.082, 110.518 |
Unit cell angles | 90.00, 106.57, 90.00 |
Refinement procedure
Resolution | 56.430 - 1.450 |
R-factor | 0.1482 |
Rwork | 0.148 |
R-free | 0.18080 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | MtHISN6_open |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 56.430 | 56.430 | 1.540 |
High resolution limit [Å] | 1.450 | 4.350 | 1.450 |
Rmerge | 0.079 | 0.028 | 1.359 |
Rmeas | 0.086 | 0.031 | 1.475 |
Total number of observations | 1710052 | ||
Number of reflections | 252775 | 9588 | 40508 |
<I/σ(I)> | 13.71 | 53.46 | 1.3 |
Completeness [%] | 99.6 | 99.5 | 99 |
Redundancy | 6.765 | 6.736 | 6.585 |
CC(1/2) | 0.999 | 0.999 | 0.628 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 292 | 0.2M ammonium acetate; 0.1M BIS_TRIS pH6.5; 25% w/v polyethylene glycol 3,350 |