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8BEQ

Structure of fructofuranosidase from Rhodotorula dairenensis

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALBA BEAMLINE XALOC
Synchrotron siteALBA
BeamlineXALOC
Temperature [K]100
Detector technologyPIXEL
Collection date2020-09-12
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.979257
Spacegroup nameC 2 2 21
Unit cell lengths103.383, 108.235, 196.599
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.450 - 2.070
R-factor0.1736
Rwork0.172
R-free0.20920
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4eqv
RMSD bond length0.008
RMSD bond angle1.424
Data reduction softwareXDS (Version January 31, 2020)
Data scaling softwareXDS (Version January 31, 2020)
Phasing softwareMOLREP (7.0.077)
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.4502.120
High resolution limit [Å]2.0702.070
Rmerge0.1450.666
Rmeas0.1610.742
Rpim0.0690.321
Number of reflections669214459
<I/σ(I)>9.93.5
Completeness [%]99.599.9
Redundancy5.55.4
CC(1/2)0.9930.741
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.529125% PEG 3350, 0.2 M ammonium acetate, 0.1 M Bis-Tris pH 5.5. Cryocooling: mother liquor solution supplemented with 15% glycerol. 8 mg mL-1 protein concentration and 2:1 (protein: reservoir) rate.

220113

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