8BEG
Structure of Ig-like domains from PrgB
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-12-15 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.975 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 76.000, 87.500, 224.800 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.290 - 1.840 |
R-factor | 0.2108 |
Rwork | 0.209 |
R-free | 0.24550 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Alphafold model |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.9.2) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.290 | 47.290 | 1.900 |
High resolution limit [Å] | 1.790 | 5.350 | 1.790 |
Rmerge | 0.071 | 0.030 | 1.839 |
Rmeas | 0.077 | 0.032 | 1.998 |
Total number of observations | 915892 | ||
Number of reflections | 139448 | 5708 | 20991 |
<I/σ(I)> | 12.43 | 47.67 | 0.77 |
Completeness [%] | 98.6 | 99.4 | 92.5 |
Redundancy | 6.568 | 6.173 | 6.434 |
CC(1/2) | 0.999 | 0.999 | 0.609 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | CaCl2, PEG3350 |