8BC6
Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex an aspartimide degron peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-05-09 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 1.000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 56.966, 59.015, 88.651 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.230 - 1.720 |
R-factor | 0.196 |
Rwork | 0.195 |
R-free | 0.22261 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 4v2y |
RMSD bond length | 0.012 |
RMSD bond angle | 1.753 |
Data reduction software | XDS |
Data scaling software | XDS |
Refinement software | REFMAC (5.8.0266) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 37.230 | 1.820 |
High resolution limit [Å] | 1.718 | 1.720 |
Rmerge | 0.074 | 1.749 |
Number of reflections | 32513 | 5140 |
<I/σ(I)> | 19.8 | 1.34 |
Completeness [%] | 99.6 | 99.4 |
Redundancy | 12.73 | 12.46 |
CC(1/2) | 1.000 | 0.632 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 294 | 0.5 M (NH4)H2PO4 |