Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8BBN

SARS-CoV-2 Delta-RBD complexed with BA.2-10 and EY6A Fabs

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2022-10-05
DetectorDECTRIS EIGER2 XE 16M
Wavelength(s)0.97628
Spacegroup nameP 21 21 21
Unit cell lengths170.655, 171.691, 176.991
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution55.790 - 3.580
R-factor0.268
Rwork0.265
R-free0.31390
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7nx6
RMSD bond length0.002
RMSD bond angle0.523
Data reduction softwarexia2
Data scaling softwarexia2
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]57.0003.650
High resolution limit [Å]3.5803.580
Rmerge0.467
Rpim0.130
Number of reflections616702966
<I/σ(I)>4.10.3
Completeness [%]100.097.2
Redundancy13.8
CC(1/2)0.9920.301
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29310% (v/v) 2-propanol, 0.1 M BICINE, pH 8.5 and 30% (w/v) PEG 1500

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon